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Reads in NGS Are Distributed over a Sequence Very Inhomogeneously
Автор | Michael, Sadovsky | |
Автор | Victory, Kobets | |
Автор | Georgy, Khodos | |
Автор | Dmitry, Kuzmin | |
Автор | Vadim, Sharov | |
Дата внесения | 2020-01-20T07:56:58Z | |
Дата, когда ресурс стал доступен | 2020-01-20T07:56:58Z | |
Дата публикации | 2019-05 | |
Библиографическое описание | Michael, Sadovsky. Reads in NGS Are Distributed over a Sequence Very Inhomogeneously [Текст] / Sadovsky Michael, Kobets Victory, Khodos Georgy, Kuzmin Dmitry, Sharov Vadim // Lecture Notes in Computer Science. — 2019. — Т. 11465. — С. 271-282 | |
ISSN | 03029743 | |
URI (для ссылок/цитирований) | https://link.springer.com/chapter/10.1007%2F978-3-030-17938-0_25 | |
URI (для ссылок/цитирований) | https://elib.sfu-kras.ru/handle/2311/129302 | |
Аннотация | Distribution of read starts over a sequences genetic entity is studied. Key question was whether the starts are distributed uniformly and homogeneously along a sequence, or there exist some spots of the increased local density of the starts. To answer the question, 15 bacterial genomes have been studied. It was found that some genomes exhibit extremely far distribution pattern, from an homogeneity, while others show lower level of the inhomogeneity. The inhomogeneity level was determined through the Kullback-Leibler distance between the real string distribution, and that one bearing the most probable continuations of the shorter strings. © 2019, Springer Nature Switzerland AG. | |
Тема | Digitalization Entropy Equilibrium Mutual entropy Order | |
Название | Reads in NGS Are Distributed over a Sequence Very Inhomogeneously | |
Тип | Journal Article | |
Тип | Journal Article Preprint | |
Страницы | 271-282 | |
ГРНТИ | 34.03.23 | |
Дата обновления | 2020-01-20T07:56:58Z | |
DOI | 10.1007/978-3-030-17938-0_25 | |
Институт | Институт космических и информационных технологий | |
Подразделение | Кафедра высокопроизводительных вычислений | |
Журнал | Lecture Notes in Computer Science | |
Квартиль журнала в Scopus | Q2 | |
Квартиль журнала в Web of Science | без квартиля |